FRATEURIA AURANTIA PDF

genus and species name, Frateuria aurantia, for strains IF0 ,,, and to Strain IF0 was found to be a strain of. Gluconobacter. Frateuria aurantia DSM (Project ID: ). Product: High Quality Draft. Proposal Name: GEBA Proposal (Proposal ID: ). Project PI: Jonathan Eisen. Potassium-mobilizing bacterial strain Frateuria aurantia was examined for Bacterial strain F. aurantia was able to enhance potassium uptake efficiently in.

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Frateuria aurantia

Possible mis-assemblies were corrected with gapResolution [ 33 ], Dupfinisher [ 36 ], or sequencing cloned bridging PCR fragments with subcloning.

TAS [ 24 ]. An effective tool for using ultra short reads in microbial genome assembly and finishing.

Lect Notes Comput Sci ; Cell cycle control, cell division, chromosome partitioning. Traceable Author Statement i. From outside to center: Besides trace amounts of diploptene and rearranged compounds like fernene [ 3 ], the main lipids isolated from DSM T fratduria iso -branched fatty acids and triterpenoids of the hopane family, such as bacteriohopanetetrol and derived hopanoid.

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RNA processing and modification. The final assembly containedpyrosequence and 25, Illumina reads.

K-Mobil (Potash Mobilizing bacteria): Frateuria aurantia

The most frequently occurring keywords within the labels of all environmental samples which yielded hits were ‘soil’ 5. The organism also produces ubiquinone Q8 [ 27 ]. Influence of the temperature and the growth phase on the hopanoids and fatty acids content of Frateuria aurantia DSMZ Amino acid transport and metabolism. A phylogeny-driven Genomic Encyclopedia of Bacteria and Archaea. Iain launched the archaeal tree of life sequencing program at trateuria Joint Genome Institute and he was a key member of the team of scientists and engineers that developed IMG.

Towards a natural system of organisms. Bull Agric Chem Soc Jpn ; List of growth media used at DSMZ: Please review our privacy policy. Journal List Stand Genomic Sci v. Stand Genomic Sci ; 1: Appl Environ Microbiol ; Cells grow well at pH 3.

auramtia The Gene Ontology Consortium. Here we present a summary classification and a set of features for F. Genes with transmembrane helices. National Center for Biotechnology InformationU.

K Sol B from Frateuria aurantia :: Agri Life

Finishing repeat regions automatically with Dupfinisher. An empirical test of the midpoint rooting method.

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General function prediction only. GenBank Date of Release. Genome sequencing and assembly The genome was sequenced using a combination of Illumina and sequencing platforms.

K-Mobil (Potash Mobilizing bacteria): Frateuria aurantia

All general aspects of library construction and sequencing can be found at the JGI website [ 33 ]. Environ Microbiol ; 3: We would like to gratefully acknowledge the ayrantia of Markus Kopitz for growing F. A rapid bootstrap algorithm for the RAxML web servers. They are oxidase positive and catalase negative [ 1 frateria physiological features and antibiotic susceptibilities were reported in great detail in [ 1 ].

The genome project is deposited in the Genomes On Line Database [ 14 ] and the complete genome sequence is deposited in GenBank.